BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB021F06LP1|AL427788
(940 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1313 946 0.0
>3x_Contig1313
Length = 8010
Score = 946 bits (466), Expect = 0.0
Identities = 774/890 (86%)
Strand = Plus / Plus
Query: 51 tactcttttttgtaactttgttgctagtgcttttactatttgcattgckacctttaataa 110
|||||||||||| ||||||||||| |||||||||||||| ||||||| |||| ||||||
Sbjct: 2022 tactcttttttgcaactttgttgccagtgcttttactatccgcattgccacctctaataa 2081
Query: 111 tkkttttkttttttttsttggaragtgaacggttggaaagatgtgtagagacaatgagtg 170
| || | || | ||| || || ||||||| |||||||||||||||||| ||||||||||
Sbjct: 2082 tccttctcttctctttcttcgaaagtgaaccgttggaaagatgtgtagacacaatgagtg 2141
Query: 171 agtttagtttatcatcgatgtgattttkttcgtttgagtttttgatttggractttttgk 230
||| ||| | ||||||||| ||||| ||| | ||| || ||||| ||| || ||||
Sbjct: 2142 agtctagctcatcatcgatctgattcccttcctctgacttcttgatctggaaccttttcc 2201
Query: 231 aaggrggtacgtgttckgagattttaatatattgtttattgctgtgttggtatatttkta 290
||| ||||||||||| || || |||||||||||||||||||||||||| ||||||| ||
Sbjct: 2202 aagcaggtacgtgttccgacatcttaatatattgtttattgctgtgttgctatatttcta 2261
Query: 291 tgatattragagagggagtkatagtttctatagttkagatatagtctgtatagtatgtga 350
||||||| | |||| ||| |||||||||| |||| ||||||| |||||||| ||| | |
Sbjct: 2262 tgatattaacagagccagtaatagtttctacagttcagatatactctgtatactatctca 2321
Query: 351 tttkattttatgtgatgtaarggtcttgttttkaagaaattttgaggtgagtttttgaaa 410
| | || | || | || ||| | |||| |||| | ||||||| || | ||||||| |||
Sbjct: 2322 tctcatctcatctcatctaaagctcttcttttcaccaaattttcagctcagtttttcaaa 2381
Query: 411 ragaratagtttatttrgtatgggaraggrgattgagatggggtgaatgaaatttgarct 470
||| ||| ||||||| ||||||| | |||| | |||| | |||||| ||||| ||
Sbjct: 2382 aagaaatactttatttactatgggaaaaaagattcaaatggactcaatgaactttgaact 2441
Query: 471 tgtatgtdcgagtttatattgtgatattgratgatattttgtgagatatgatttagtttt 530
|||||| | | |||||||| | || | | |||||||||| ||| ||||||||| |||||
Sbjct: 2442 cgtatgtaccactttatattctcatctcgaatgatattttctgacatatgatttcgtttt 2501
Query: 531 trgtgtaggaatgataaagttattgctcggttgggtgtgattgtttggttgagagtactg 590
| || || ||| ||||| ||||||||||| ||||| | || |||||||| ||| |||||
Sbjct: 2502 tagtctaccaatcataaacttattgctcggctgggtctcatcgtttggttcagactactg 2561
Query: 591 tgttggacttgagaggattttgttctgttgttttattcaacggttagtatttctgtcctc 650
||||||||||||||||||||| |||| |||||||||||||||||||||||||||||||||
Sbjct: 2562 tgttggacttgagaggattttcttctcttgttttattcaacggttagtatttctgtcctc 2621
Query: 651 gagaatcataattgggcmtgagcatagactgaaataccaaaatcaamagtttgagttggg 710
||||||||||||||||| |||||||||||||||||||||||||||| |||||||||||||
Sbjct: 2622 gagaatcataattgggcctgagcatagactgaaataccaaaatcaacagtttgagttggg 2681
Query: 711 tccctamgatactactacggggacttaatatagaagcttgattacattctttttattata 770
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2682 tccctacgatactactacggggacttaatatagaagcttgattacattctttttattata 2741
Query: 771 tttaatgtgttcttagaatttcccaatgtagacctctctctattcttgtcctttcaatag 830
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2742 tttaatgtgttcttagaatttcccaatgtagacctctctctattcttgtcctttcaatag 2801
Query: 831 tttttttctwcactaaggaatagcytttgtttaaatcccaaacaaaatgaaatcgttctt 890
||||||||| |||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 2802 tttttttctccactaaggaatagcctttgtttaaatcccaaacaaaatgaaatcgttctt 2861
Query: 891 tcacattaaatcttgaactcttgaatggaaactcggcaagtatggsagac 940
||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 2862 tcacattaaatcttgaactcttgaatggaaactcggcaagtatggcagac 2911
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.41 0.716 1.33
Gapped
Lambda K H
1.41 0.716 1.33
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6448
Number of Sequences: 1807
Number of extensions: 6448
Number of successful extensions: 134
Number of sequences better than 1.0e-20: 1
length of query: 940
length of database: 10,358,551
effective HSP length: 16
effective length of query: 924
effective length of database: 10,329,639
effective search space: 9544586436
effective search space used: 9544586436
T: 0
A: 40
X1: 5 (10.1 bits)
X2: 14 (28.4 bits)
S1: 12 (24.8 bits)
S2: 49 (99.9 bits)